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Tables of one-to-one ortholog genes predicted in reciprocal blasts between P. fissidentatus and one of eight nematode species

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DataCite Commons2024-10-02 更新2024-11-06 收录
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https://figshare.com/articles/dataset/Tables_of_one-to-one_ortholog_genes_predicted_in_reciprocal_blasts_between_P_fissidentatus_and_one_of_eight_nematode_species/27150945
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Tab-separated files indicating gene names and positions of one-to-one ortholog genes for comparative synteny analysis. One-to-one orthologs was predicted when the top hit gene was identical in reciprocal blast search. P. fissidentatus (Pfis) was compared with one of eight nematode species. The 1st. column, gene names of the test species (one of eight species); the 2nd., gene names of P. fissidentatus; the 3rd., chromosomes of the test species; the 4th., positions within the chromosome of the test species; the 5th., chromosomes of P. fissidentatus; the 6th., positions within the chromosome of P. fissidentatus. Species name abbreviation: Bmal, Brugia malayi; Bxyl, Bursaphelenchus xylophilus; Cele, C. elegans; Otip, Oscheius tipulae; Pent, Pristionchus entomophagus; Pexs, Pristionchus exspectatus; Pfis, Pristionchus fissidentatus; Pmay, Pristionchus mayeri; Ppac, Pristionchus pacificus.
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figshare
创建时间:
2024-10-02
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