five

Paired bulk and single-cell RNA-seq on high-grade serous ovarian cancer (HGSOC) samples

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NIAID Data Ecosystem2026-05-02 收录
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https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE217517
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We have sequenced ovarian tumors in several different ways: 1) poly-A captured scRNA-seq, 2) poly-A captured pooled scRNA-seq in pools of 4 samples each 3) Bulk RNA-seq on ribo-depleted tumor chunks 4) Bulk RNA-seq on poly-A captured dissociated cells 5) Bulk RNA-seq on ribo-depleted dissociated cells Gene expression was measured at both the bulk and single-cell level for HGSOC samples from separate, unrelated individuals. The initial dataset contains 34 samples from 8 individuals. ***Raw data are being deposited in dbGaP due to patient privacy concerns***
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2025-04-16
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