Meg3-MN1 targeted genes and the associated alternative splicing

This repository is related to manuscript, titled "Meg3 lncRNA Organizes ELAVL Condensates to Facilitate Long Neuronal Gene Maturation". All the file information was included in the file, *meta_data_forZenodo_Meg3_manuscript.xlsx*. There are four major anlaysis in this folder + Identify the Meg3-MN1 targeted peaks by using ChIRP-seq + The characteristics of Meg3-MN1 targeted genes, including gene length, exon numbers, and distance to neighbouring genes. + The alternative splicing events identified by RMATS and their distance to neighbering Meg3-MN1 peaks + The Meg3-MN1 targeted genes are enriched in long-neuronal genes