Microfluidic study in a meter-long reactive path reveals how the medium's structural heterogeneity shapes MICP-induced biocementation

This folder includes processed images and image analysis algorithm for the publication "Microfluidic study in a meter-long reactive path reveals how the medium’s structural heterogeneity shapes MICP-induced biocementation".

Each folder contains the results of image processing OBJ.

Color explanation

white: pore fluid, blue: bacteria, red: crystals, black: solid

Numbering

xy shows the id number of position

t shows the id number of the time point

Metadata

Metadata extracted from microscopes during image acquisitions are provided in.txt format

a .txt file is included showing the time of image acquisition in the first column

the excel file shows the distance from injection point where images were captured