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Additional file 4 of Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential

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DataCite Commons2025-01-15 更新2025-05-07 收录
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Additional file 4. Tables for Mash-based clustering and silhouette scores. Table S6. Mash distances. Table with Mash based distances across all 2371 selected genomes. Table S7. Silhouette scores (primary). Table with list of 2371 genomes with assigned clusters based on clustering analysis. The columns represent the assigned clusters after each filtering round (upto 5). The genomes being removed based on silhouette score cutoff of 0.4 are annotated as “Dropped”. The columns also mention the silhouette score at each round of filtering. The final round includes 1999 genomes with primary Mash-cluster assignments. Table S8. Silhouette scores (secondary). Table with list of 1999 genomes with assigned clusters at secondary level based on clustering analysis. The columns represent the assigned clusters after each filtering round (upto 3). The genomes being removed based on silhouette score cutoff of 0.4 are annotated as “Dropped”. The columns also mention the silhouette score at each round of filtering. The final round includes 1670 genomes with secondary Mash-cluster assignments.
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figshare
创建时间:
2025-01-15
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