Supporting data: Phylogenomic analyses re-examine the evolution of reinforcement and hypothesized hybrid speciation in Phlox wildflowers

Sequence data in support of manuscript titled "Phylogenomic analyses
re-examine the evolution of reinforcement and hypothesized hybrid
speciation in Phlox wildflowers." This data was generated following a
ddRAD sequencing protocol and used in phylogenomic studies to examine the
evolutionary history of the eastern standing Phlox and evaluate hypotheses
about if and how hybridization and gene flow played a role in their
diversification. Our results provide novel resolution of the phylogenetic
relationships in this group, including paraphyly across some taxa. We
identify gene flow during one case of reinforcement and find genomic
support for a hybrid lineage underlying one of the five hypothesized
homoploid hybrid speciation events. Additionally, we estimate the
ancestries of four allotetraploid hybrid species. Our results are
consistent with hybridization contributing to diverse evolutionary
outcomes within this group; although, not as extensively as previously
hypothesized.