Examination of mRNA decay rate in mouse embryonic fibroblasts
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Examination of mRNA decay rate in mouse embryonic fibroblasts
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2020-01-29
相关数据集
Codon stability scores for individual codons.
Individual codons are listed with calculated CSC scores for mRNA half-lives determined using the SLAM-Seq protocol. mESCs were cultured under control conditions or were treated with 0.1 μg/mL G418 or
Figshare2022-07-28 更新60
ExtFig6B_RACE_STOML2_R3_LG395_annotated.tif
HEK293T ishXrn1 cells were treated with doxycycline for 3-4 days to induce knock down of Xrn1, then transfected with a luciferase reporter with a 15 bp inserted sequence from the STOML2 gene, wild-typ
NIAID Data Ecosystem20
Stabilities of 5pseq mRNAs.
Columns are log2(fold change) (l2fc) and adjusted p-value (padj) calculated using DESeq2 for ActD-treated/untreated in control conditions in HeLa cells, ActD-treated/untreated in Torin 1-treated HeLa
Figshare2022-11-28 更新20
PNPase autocontrols its expression by degrading a double-stranded structure in the pnp mRNA leader
Polynucleotide phosphorylase synthesis is autocontrolled at a post-transcriptional level in an RNase III-dependent mechanism. RNase III cleaves a long stem–loop in the pnp leader, which triggers pnp m
PubMed Central2001-12-03 更新30
Expression of the human RNA-binding protein HuR in Trypanosoma brucei increases the abundance of mRNAs containing AU-rich regulatory elements
The salivarian trypanosome Trypanosoma brucei infects mammals and is transmitted by tsetse flies. The mammalian ‘bloodstream form’ trypanosome has a variant surface glycoprotein coat and relies on gly
PubMed Central2002-10-15 更新20
