Additional file 1 of Functionally distinct core microbes of Tricholoma matsutake revealed by cross-study analysis

Supplementary Material 1: Supplementary Table S1. Sampling locations and the number of shiro samples collected in this study. Supplementary Table S2. Reanalyzed studies on shiro microbes. Supplementary Table S3. Summary of key studies investigating shiro microbes without publicly available sequence data. Supplementary Table S4. Taxonomic assignment of shiro bacterial sequences. Supplementary Table S5. Taxonomic assignment of shiro fungal sequences. Supplementary Table S6. Shiro core microbial phylotypes. Supplementary Data S7. Niche-specific taxa distinguishing S-soil and NS-soil. Analytical indices include LEfSe scores, ISA values, and co-occurrence index for each study. Supplementary Table S8. S-root- and S-fruitbody- specific taxa detected using LEfSe among S-soil, S-root, and S-fruitbody samples. Supplementary Table S9. Phylotypes representing significant correlation with Tricholoma matsutake (|r| ≥ 0.35). Supplementary Table S10. Predicted enzymatic activities enriched in bacterial communities of different niches. Supplementary Table S11. Predicted metabolic pathways (KEGG) enriched in fungal communities of different niches. Overlapped functions among studies are highlighted in bold.