S7-LP_annots_on_QTL.xlsx

<strong>Table S7 | </strong>Annotations, genomic locations, and QTL associations of <em>L. paranigra </em>transcripts expressed on QTL scaffolds. Column headers are defined as follows; <em>scaffold</em>: scaffold identity, <em>transcript: </em>transcript identifier, <em>start: </em>genomic location of start of transcript, <em>stop</em>: genomic location of end of transcript, <em>direction</em>: indicator of which direction the transcript is transcribed in, <em>Entry_Name</em>: Uniprot ID assigned to transcript, <em>Protein_Name</em>: Protein name associated with Uniprot_ID, <em>Gene_Name</em>: Gene names associated with Uniprot_ID,<em> pident</em>: percentage of identical matches, <em>length: </em>length (in bp) of sequence overlap, <em>mismatch</em>: number of mismatches, <em>gapopen</em>: number of gap openings, <em>qstart</em>: start of alignment in query, <em>qend</em>: end of alignment in query, <em>sstart:</em> start of alignment in subject, <em>send</em>: end of alignment in subject, <em>evalue</em>: expect value, <em>bitscore</em>: bit score, <em>size</em>: size (in bp) of scaffold, <em>LG</em>: linkage group on which the scaffold falls, <em>start_position</em>: genomic location of start of scaffold, <em>end_position</em>: genomic location of end of scaffold, <em>id_source</em>: study in which the scaffold has been identified, <em>peak_location_reanalysis</em>: location (in cM) of given QTL peak in present study, <em>scaffold_type_reanalysis</em>: indicator of whether the scaffold is the peak scaffold or merely falls within the CI in present study, <em>peak_location_finemap</em>: location (in cM) of given QTL in Xu &amp; Shaw 2019, <em>scaffold_type_reanalysis</em>: indicator of whether the scaffold is the peak scaffold or merely falls within the CI in Xu &amp; Shaw 2019.