This archive contains:1) The transcriptome fasta and gtf files2) The transcriptome assembly ortholog table (txt and xlsx)3) A Perl script to run RSEM on a transcriptome reference4) The RSEM-bowtie2 tr
Reads for both yound and old libraries can be found in NCBI SRA: http://www.ncbi.nlm.nih.gov/bioproject/402032 Assembly was performed as follows: #ADAPTER AND QUALITY TRIMMING TrimmomaticPE: Started