Plotting ancestral states from MCMCglmm example
收藏DataCite Commons2025-05-01 更新2024-07-27 收录
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https://figshare.com/articles/Plotting_ancestral_states_from_MCMCglmm_example/7756526/1
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资源简介：
R code that takes tip and internal node model estimates from MCMCglmm phylogenetic mixed model, and associates them with the tree, so it you can output a tree file and read into figtree (https://github.com/rambaut/figtree/releases) to make pretty colour gradients of states across the tree e.g. https://doi.org/10.1371/journal.ppat.1007185.g002<br>Make sure to add the Nexus block to the final .tre file:<br>"#NEXUS<br>Begin trees;”<br><br>then your tree<br><br>“End;”<br><br>Data from Roberts et al. 2018 https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1007185
提供机构：
figshare
创建时间：
2019-02-22
