Original data for "Mapping Cardiac and Respiratory Pulsations Simultaneously with Functional Connectivity in the Rat Brain Using Zero Echo Time fMRI"

In this folder, scripts and data related to the manuscript "Mapping Cardiac and Respiratory Pulsations Simultaneously with Functional Connectivity in the Rat Brain Using Zero Echo Time fMRI" are stored.

"scripts" folder contains scripts in Matlab and Python used to perform all data preprocessing and analysis steps.

"derivatives" folder contains:
-denoised ECG files in .mat format along with detected R-R and breathing peaks,
-reconstructed in three ways functional ZTE files in NIfTi format(cardiac-gated, respiratory-gated and traditional resting-state),
-MB-SWIFT anatomical images.
All MRI images are coregistered to the common template. Folder is organized in BIDS format.

"extras" folder contains coregistration template and ROIs used for the data analysis.

For further inquiries please contact: Ekaterina Paasonen, [e-mail]