遇见数据集

kraken2 database of marine animal genomes, for host decontamination

收藏
Zenodo2025-12-11 更新2026-05-26 收录
官方服务:

资源简介:

kraken2 database of common marine animal hosts in marine metagenomic dataset. Used in Nephele pipelines for decontamination of metagenomic datasets from common marine animal host reads (database inclusive of human genome). Content of assemblies: Homo sapiens (GRCh38.p13), Conus ventricosus (ASM1839881v1), Crassostrea virginica (C_virginica-3.0) , Crassostrea gigas (cgigas_uk_roslin_v1), Mytilus galloprovincialis (MGAL_10), Octopus sinensis (ASM634580v1), Paraescarpia echinospica (HKBU_Pec_v1), Streblospio benedicti (ASM1909598v1), Hyalella azteca (Hazt_2.0.2), Amphibalanus amphitrite (NRLGWU_Aamphi_draft), Paramacrobiotus sp. TYO (Prichtersi_v1.0), Hypsibius dujardini (ASM157998v1), Lytechinus pictus (UCSD_Lpic_2.0), Strongylocentrotus purpuratus (Spur_5.0), Apostichopus parvimensis (Ppar_1.0), Hydra vulgaris (Hydra_105_v3), Hydra viridissima (ASM1470644v1), Pocillopora damicornis (ASM370409v1), Amphimedon queenslandica (assembly v1.0)

提供机构:
Zenodo
创建时间:
2025-12-11
二维码
社区交流群
二维码
科研交流群
商业服务