Deep Integrated Network Analysis – a data-driven tool to discover and characterize disease pathways in the liver

General description:Supplementary information belonging to the study "Deep Integrated Network Analysis – a tool to discover and characterize disease pathways in the liver". Files:

1) Supplementary Figure 1 _ TLN .pdfContains the Tree-and-Leaf (TLN) network on which the leaves have been classified according to Gene Ontology Biological Processes. 

2) Supplementary Table 1 _ Datasets.xlsx

Contains the list of datasets included in Liver DINA Resource.

For each dataset the GEO series, title, taxonomy, and liver sample count are shown, as well as the classification of dataset condition. 

3) Supplementary Table 2 _ Top1000 subset _gene interaction networks.xlsx

Contains the results from the analysis of the 1,000 gene-gene interactions with the highest statistical weight in the Liver DINA Resource. 

4) Supplementary Table 3_ TLN modules.xlsx

Contrains the classification of the leafs in the Liver DINA Resource Tree-and-Leaf Network (TLN).