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资源简介：
E.coli Core Model with Beta Oxidation Cycle.
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创建时间：
2016-06-02
相关数据集
Data for: Integrating genome-scale metabolic models into the prediction of microbial kinetics in natural environments
The goal of the MATLAB code is to simulateg the metabolism of Methanosarcina barkeri by linking COBRA toolbox with PHREEQC. COBRA toolbox specializes in the analysis of genome-scale metabolic models,
DataCite Commons2025-04-01 更新90
MOESM1 of Genome-scale metabolic model analysis indicates low energy production efficiency in marine ammonia-oxidizing archaea
Additional file 1: Table S1. Transport reactions in the model for the exchange of metabolites between the cell and the environment. Table S2. Biomass components and their coefficients.
NIAID Data Ecosystem40
Comparison of the number of reactions added to the metabolic models used in the study after the application of the community gap-filling method and individual-organism gap-filling methods.
The metabolic models of the E. coli glucose utilizer, the E. coli acetate utilizer, the B. adolescentis ATCC 15703, the F. prausnitzii A2–165, the Dehalobacter sp. CF and the Bacteroidales sp. CF50 we
Figshare2021-11-01 更新20
MEMOTE reports for models from: A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality
Data accompanying the manuscript: A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality.Authors: Hawkey J., Vezina B., Monk J.M., Judd L.M., Harshe
Research Data Australia70
Additional file 7: Table S9. of Mapping the landscape of metabolic goals of a cell
shows invFBA results from L1 and L0 regularization of simulated E. coli data under glucose minimal medium (with minimization of glucose uptake as the objective). (XLSX 8 kb)
Figshare2016-12-14 更新30
