Python script that reads from bam file based on presence of alleles in text file (text file with three columns: 1. Chromsome, 2. Position, 3. alllele [A, T, C, G]). Returns a bam file with extracted r
The folder "Concatenation_11S_no_missing.fas" contains the concatenated dataset of 11S_no_missing. The folder "Concatenation_103S_missing_0.25.fas" contains the concatenated dataset of 103S_missing_0.
