Additional file 1 of Uncovering the genomic potential of the Amazon River microbiome to degrade rainforest organic matter

Additional file 1: Supplementary Tables. (1) Description of the 106 metagenomes used to build the Amazon River basin Microbial non-redundant Gene Catalogue (AMnrGC). The Amazon River basin section shows the group that a sample belongs to according to its geographic location. Other features were obtained from the original publications and SRA codes. “N.A.” stands for not available. (2) Co-assembly groups used to build the Amazon River basin Microbial non-redundant Gene Catalogue (AMnrGC). (3) Metagenomes used for K-mer diversity assessment. (4) Correlation and significance between gene content and environmental variables. Pearson’s correlation coefficients are shown under the diagonal and correspondent p-values are shown in red above the diagonal. The correlations were calculated using complete pairwise observations. (5) Reference proteins and protein families involved in terrestrial organic matter degradation used to annotate proteins related to lignin oxidation, cellulose and hemicellulose degradation in the AMnrGC.