Data from: Short- and long-term changes in sugarbeet (Beta vulgaris L.) gene expression due to postharvest jasmonic acid treatment - Data

Jasmonic acid is a natural plant hormone that induces native defense responses in plants. Sugarbeet (Beta vulgaris L.) root unigenes that were differentially expressed 2 and 60 days after a postharvest jasmonic acid treatment are presented. Data include changes in unigene expression relative to water-treated controls, unigene annotations against nonredundant (Nr), Swiss-Prot, Clusters of Orthologous Groups (COG), and Kyoto Encyclopedia of Genes and Genomes (KEGG) protein databases, and unigene annotations with Gene Ontology (GO) terms. Putative defense unigenes are compiled and annotated against the sugarbeet genome. Differential gene expression data were generated by RNA sequencing. Interpretation of the data is available in the research article, "Jasmonic acid causes short- and long-term alterations to the transcriptome and the expression of defense genes in sugarbeet roots" (K.K. Fugate, et al., Plant Gene 9:50-63) Resources in this dataset:Resource Title: Short- and long-term changes in sugarbeet (Beta vulgaris L.) gene expression due to postharvest jasmonic acid treatment - Data. File Name: Web Page, url: https://www.sciencedirect.com/science/article/pii/S2352340917300276 Data in Brief: Data on sugarbeet root unigenes that were differentially expressed due to a postharvest jasmonic acid (JA) treatment are presented. Data identify unigenes that were differentially expressed 2 and 60 d after JA treatment. Data include the logarithm of the fold change in expression due to JA treatment, relevant statistics related to changes in expression, unigene annotations generated by BLASTx search against nonredundant (Nr), Swiss-Prot, Clusters of Orthologous Groups (COG), and Kyoto Encyclopedia of Genes and Genomes (KEGG) protein databases, and Gene Ontology (GO) annotations (Tables 1 and 2). In addition, differentially expressed genes with putative defense functions were identified, compiled, and further annotated by comparison to the sugarbeet genome.

茉莉酸是一种天然植物激素，能够诱导植物产生固有防御反应。本数据集展示了糖 beet（Beta vulgaris L.）根中差异表达的 unigenes，这些 unigenes 在收获后茉莉酸处理 2 天和 60 天后发生差异表达。数据包括与水处理对照组相比的 unigene 表达变化，以及对非冗余（Nr）、Swiss-Prot、直系同源群（COG）和京都基因与基因组百科全书（KEGG）蛋白质数据库的 unigene 注释，以及与基因本体（GO）术语的 unigene 注释。推测具有防御功能的 unigenes 被整理，并通过对糖 beet 基因组的比较进行注释。差异基因表达数据由 RNA 测序生成。数据解读可参考研究文章《茉莉酸导致糖 beet 根转录组和防御基因表达的短期及长期变化》（K.K. Fugate 等，Plant Gene 9:50-63）。本数据集包含的资源：资源标题：收获后茉莉酸处理对糖 beet（Beta vulgaris L.）基因表达的短期和长期变化 - 数据。文件名：网页，网址：https://www.sciencedirect.com/science/article/pii/S2352340917300276 数据概要：展示了由于收获后茉莉酸（JA）处理而差异表达的糖 beet 根 unigenes 数据。数据识别了在 JA 处理后 2 天和 60 天差异表达的 unigenes。数据包括由于 JA 处理导致的表达变化的倍数变化的对数，以及与表达变化相关的相关统计数据，由 BLASTx 搜索生成的 unigene 注释，针对非冗余（Nr）、Swiss-Prot、直系同源群（COG）和京都基因与基因组百科全书（KEGG）蛋白质数据库，以及基因本体（GO）注释（表 1 和 2）。此外，还确定了具有推测防御功能的差异表达基因，并将其整理和进一步注释，通过比较糖 beet 基因组进行。