MONet/1000 Soils metagenome pathway modelling narrative w/ auto batch import
收藏DataCite Commons2026-02-23 更新2026-04-25 收录
下载链接：
https://www.osti.gov/servlets/purl/3020148
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资源简介：
This narrative performs metabolic modeling and flux balance analysis (FBA) using metagenome-assembled genomes (MAGs) from the 1000 Soils samples, as described by Song et al. (2026, accepted). The set of MAGs (in FASTA format) is converted into a set of assembly objects compatible with functional annotation via RASTtk, yielding a set of genome objects that undergo metabolic modeling via OMEGGA. These genome objects are then used to conduct FBA, generating tables of metabolite uptake rates across the MAGs under investigation.
提供机构：
U.S. Department of Energy Systems Biology Knowledgebase (KBASE)
创建时间：
2026-02-23
