Sample paired datasets for ECLARE analysis
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Sample paired datasets for ECLARE analysis. Includes snRNA-seq and snATAC-seq data. Target dataset: PFC_Zhu Source datasets: DLPFC_Ma, DLPFC_Anderson Once unzipped, data is organized into subdirectories with the following structure: for PFC_Zhu: "PFC_Zhu/<modality>_<genes_by_peaks_str>_aligned_source_<source_dataset>.h5ad" for DLPFC_Ma: "DLPFC_Ma/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad" "DLPFC_Ma/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>" for DLPFC_Anderson: "DLPFC_Anderson/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad" "DLPFC_Anderson/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>" where <genes_by_peaks_str> is unique to each source-target datasets combination. Datasets were sourced from studies cited in Table 1 of the manuscript. Datasets have then been preprocessed and features aligned across source and target.



