Additional file 3 of Growth of sulfate-reducing Desulfobacterota and Bacillota at periodic oxygen stress of 50% air-O2 saturation
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Supplementary Material 3: Supplementary Table S1. Relative abundance of amplicon sequence variants (ASVs) that affiliated with known and putative sulfate-reducing bacteria. Supplementary Table S2. Basic genome characteristics of the metagenome assembled genomes (MAGs) that were assigned to sulfate-reducing bacteria. Supplementary Table S3. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Desulfosporosinus MAG BO167. Supplementary Table S4. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Desulfosporosinus MAG BO295. Supplementary Table S5. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Desulfosporosinus MAG CO4. Supplementary Table S6. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Humidesulfovibrio MAG BO58. Supplementary Table S7. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Syntrophobacteraceae SbD1 MAG BA69. Supplementary Table S8. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Syntrophobacteraceae SbD1 MAG BA129. Supplementary Table S9. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Desulfomonilaceae CAJBEZ01 MAG BA410. Supplementary Table S10. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of Desulfocapsaceae CAIUQR01 MAG CA64. Supplementary Table S11. Transcription levels (RPKM) of ribosomal protein-encoding genes used to normalize transcriptional activity as presented in Figure 5 and Figure 6. Supplementary Table S12. Annotations and global transcriptional activity (reads per kilobase million, RPKM) of genes that encode proteins involved in oxygen reduction, reactive oxygen species (ROS) detoxification and protein repair. Genes were collected from five SRB-MAGs affiliating with the Desulfobacterota and three SRB-MAGs affiliating with the Bacillota.
提供机构:
Dyksma, Stefan; Pester, Michael
创建时间:
2024-10-05



