Orthologous Gene Groups (OGGs) and their expression values
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下载链接:
https://dataverse.tdl.org/citation?persistentId=doi:10.18738/T8/CLHOFF
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资源简介:
--refGroups_OrthoMCLoutput.txt: Orthologous Gene Groups (OGGs) identified by orthoMCL an ortholog calling software package (http://orthomcl.org/common/downloads/software/). Orthologous gene groups were generated for all proteins from available, closely-related reference proteomes obtain from the Ensembl Genome Browser. Including [abbreviation]:
mammals [Rat]: Rattus_norvegicus.Rnor_5.0.75.pep.all.fa
birds [Gal]: Gallus_gallus.Galgal4.75.pep.all.fa
frogs [Xeno]: Xenopus_tropicalis.JGI_4.2.75.pep.all.fa
fishes [Tilapia]: Tilapia-Oreochromis_niloticus.Orenil1.0.75.pep.all.fa
--ALLsp_refGroupsIDs: the subset of OGGs that have membership in all four reference species
--[species abbreviation]_OGGs.csv: Grouping of Ensembl Proteins into Orthologous Gene Groups for each species
--[species abbreviation]_[reference abbreviation]Counts: bwa mapping idxstats output
提供机构:
Texas Data Repository
创建时间:
2018-12-12



