The target gene open reading frame protein sequences (MHC, TLR, RLR, KoRV) from the Trinotate analysis were first aligned with eutherian, marsupial, and other vertebrate sequences using Jalview 2.8.0b
This is a nexus file that provides a sequence alignment for the regions of the GOT1Sd and GOT1Sr that are alignable (and a region from 470 to 814 that does not align well in the middle). The 5-prime e
