oc_cluster

The code simulates dynamics of Nc = 32 cells on a degrading substrate with durotaxis. The code derived from the research work "Durotaxis and extracellular matrix degradation promote clustering of cancer cells" by Potomkin, Kim, Klymenko, Alber, Aranson. 1. Build & Run "OCCluster2024.cpp". The folder with this CPP file must contain the sub-folder "numerical_results" 2. Run in MATLAB: (a) "GA3video.m" to create video frames (requires sub-folder "figs/"); (b) "clusterNumbers.m" to identify cell clusters and compute cluster numbers.