Primer, pipelines, parameters - issues in 16S rRNA gene sequencing

NIAID Data Ecosystem2026-03-12 收录

微生物组测序方法

16SrRNA测序优化

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP291583 数据链接链接失效反馈

官方服务：

资源简介：

short amplicon 16S rRNA sequencing data of 3 mock communities and 33 human samples targeting different V-regions.

创建时间：

2021-06-11

Evaluating bias for Illumina-based bacterial 16S rRNA gene profiles. Illumina 16S bias evaluation

微生物组测序偏差

16SrRNA测序优化

Massively parallel sequencing of 16S rRNA genes enables the comparison of terrestrial, aquatic, and host-associated microbial communities with sufficient sequencing depth for robust assessments of bot

NIAID Data Ecosystem70

Table_7_Can Targeting Non-Contiguous V-Regions With Paired-End Sequencing Improve 16S rRNA-Based Taxonomic Resolution of Microbiomes?: An In Silico Evaluation.xlsx

16SrRNA测序优化

微生物分类学分辨率

Background: Next-generation sequencing (NGS) technologies have enabled probing of microbial diversity in different environmental niches with unprecedented sequencing depth. However, due to read-length

NIAID Data Ecosystem30

16S rRNA evaluation of common broiler chicken sampling methods: evaluating intra-flock sample size, cecal pair similarity, and cloacal swab similarity to other alimentary tract locations

动物微生物组学

16SrRNA测序优化

16S rRNA sequencing for characterization of poultry associated microbiomes has been increased in use in poultry research as sequencing costs fall and computational resources become more accessible. As

NIAID Data Ecosystem20

Additional file 1: of Latitude in sample handling and storage for infant faecal microbiota studies: the elephant in the room?

婴幼儿肠道微生物组

微生物组测序方法

Illumina Miseq expected variation. (XLS 15 kb)

Figshare2016-12-14 更新50

Mock microbial community dilution series

微生物组方法学

16SrRNA测序优化

The dataset generated for this manuscript is a dilution series of a mock microbial community. ZymoBIOMIC mock community standards was used, which consisted of eight bacterial species (Pseudomonas aeru

NIAID Data Ecosystem30

Primer, pipelines, parameters - issues in 16S rRNA gene sequencing

资源简介：

相关数据集