Supplemental data

<b>Supplemental material 1</b>. <b>Summary of scRNAseq results</b><b>Supplemental material 2. Cluster assignment by differentially expressed genes</b><b>Supplemental material 3: Confirmation of zebrafish infection model.</b>Larvae homogenate was visualized from a group injected with UPEC (experimental) versus one that was not (control). The RFP expressing bacteria were clearly visible in the experimental group. The red fluorescent images were taken at the same exposure.<b>Supplemental material 4.</b><b>Complete list of differentially expressed genes in each cluster</b><b>Supplemental material 5</b>. <b>Key genes that determine the canonical pathway assignments</b><br>