Additional file 6: of The use of genome-scale metabolic network reconstruction to predict fluxes and equilibrium composition of N-fixing versus C-fixing cells in a diazotrophic cyanobacterium, Trichodesmium erythraeum

List of effects of gene and reaction deletion identified by in silico knockout analysis. This file contains the list of effects from each gene and reaction deletion in separate tabs. Gene/reaction deletions that result in lethality are colored red, those that reduce function are colored yellow, and those that cause no change are white. The single green reaction (deletion of biomass maintenance, EN_ATP) improves gene function. Reactions have associated genes listed alongside and genes have associated reactions listed alongside. There are reports for both diazotrophs and photoautotrophs. Data is reported as ratio (growth rate of knockout divided by “wild type” growth rate), raw knockout growth rate, and change in growth rate calculated using the following equation: Δ μ = μ W T − μ mutant μ W T $$ \varDelta \mu =\frac{\mu_{WT}-{\mu}_{mutant}}{\mu_{WT}} $$ (XLSX 182 kb)