Additional file 2 of Mitochondrial supplementation of Sus scrofa metaphase II oocytes alters DNA methylation and gene expression profiles of blastocysts

Additional file 2: Table S1. Summary statistics from Sus scrofa oocyte and blastocyst WGBS data analyses. Table S2. A list of DMRs between ICSI- and mICSI-derived blastocysts commonly identified by three DMR callers. Table S3. GO enrichment analysis for genomic features related to DMRs in the biological process category, analysed by PANTHER ( http://www.pantherdb.org/ ). Table S4. GO enrichment analysis for genomic features related to DMRs in the molecular function category, analysed by PANTHER ( http://www.pantherdb.org/ ). Table S5. GO enrichment analysis for genomic features related to unique DMRs in the Oocyte vs ICSI-derived blastocyst comparison. Table S6. GO enrichment analysis for genomic features related to DMRs unique in the Oocyte vs mICSI-derived blastocyst comparison. Table S7. Summary statistics of RNAseq data for ICSI- and mICSI-derived blastocysts. Table S8. Prediction of microRNA ssc-miR-10390 target genes in the Sus scrofa genome determined by miRanda. Table S9. Mitochondrial gene expression in ICSI- and mICSI-derived blastocysts. Table S10. DMRs associated with potential DEGs. Table S11. Blastocyst development rates following ICSI and mICSI.