Additional file 10: of De novo assembly and characterization of breast cancer transcriptomes identifies large numbers of novel fusion-gene transcripts of potential functional significance

Distribution of fusion reads relative to total reads for pro-neoplastic fusion-protein transcripts in breast cancer samples. File contains fusion specific read counts, as well as, the read counts for wild-type 5′- and 3′- partner reference genes for nominated pro-neoplastic transcripts (in-frame fusion gene transcripts present in both normal and cancer samples) in breast cancer. Expression levels are presented as normalized RNA-Seq read counts as estimated using RSEM and upper quartile normalization. Column J contains relative fusion read frequency as percentage value. The first sheet in the excel file contains the data columns and a key describing the data is on the second excel sheet. (XLSX 12 kb)