Additional file 7: Table S5. of Genetic diversity, linkage disequilibrium and power of a large grapevine (Vitis vinifera L) diversity panel newly designed for association studies

Effect of subgroup, genomic region, MAF, diversity, and SNP annotation features on LD (r 2 V) extent. The three subgroups of the association panel and the wild panel were included. Pairs of SNPs were classified as having: 0, 1 or 2 SNPs with MAF < 0.2; 0, 1 or 2 SNPs with Nei < 0.3; 1 or 2 SNPs in exons. Pairs of SNPs in exons were classified as having 0, 1 or 2 synonymous SNPs. (XLSX 11 kb)