Phenazines regulated genes in Pseudomonas chlororaphis 30-84. Pseudomonas chlororaphis subsp. aureofaciens 30-84

Pseudomonas chlororaphis strain 30-84 is an effective biological control agent against take-all disease of wheat. In this study, we conducted an RNA-seq analysis by comparing the wild type strain, PCA and O star with a phenazine deficient mutant. RNA-seq analysis identified over 800 genes differentially regulated by phenazines. Overall design: A total of 8 samples were analyzed in AB medium + 2% casamino acids, Pseudomonas chlororaphis wild type strain (2 replicates); Pseudomonas chlororaphis ZN mutant (2 replicates); Pseudomonas chlororaphis PCA strain (2 replicates); Pseudomonas chlororaphis O star (2 replicates).