BIOSNAP_DDI_and_genes_data

<strong># NamE Datasets</strong><br> Jeffrey Seathrún Sardina<br> <br> <strong>## Information and Use</strong><br> Datasets for the paper "NamE: Named Graph Embeddings for Context Modelling and Expert Knowledge Integration in Knowledge Graph Embeddings". Datasets are given with all variant forms, and with the original train-test-valid spits used in the paper. Train, test, and valid files are marked as such in the file prefix (e.g. "*-train.csv.gz").<br> <br> Datasets beginning in "triples-" contain triples in a comma-separated format; i.e.<br> ```<br> subject,predicate,object<br> subject,predicate,object<br> subject,predicate,object<br> ```<br> <br> Datasets beginning in "quads-" contain quads in a comma-separated format; i.e.<br> ```<br> subject,predicate,object,namedGraph<br> subject,predicate,object,namedGraph<br> subject,predicate,object,namedGraph<br> ```<br> <br> All datasets are gzipped; on most systems (Linux / MAC) you can uncompress these with "gunzip (file)" if needed.<br> <br> <strong>## Citation</strong><br> If you use these datasets or NamE in your work, please cite "NamE: Named Graph Embeddings for Context Modelling and Expert Knowledge Integration in Knowledge Graph Embeddings"<br> ```<br> BIBTEX citation pending<br> ```<br> <br> Included below are citations to the data sources from which these datasets were created. Note that the triples form of FB15K-237, as it appears in this repository, is unmodified from its original version.<br> <br> <strong>**BIOSNAP dataset citation:**</strong><br> ```<br> @misc{biosnap,<br> author = {Marinka Zitnik, Rok Sosi\v{c}, Sagar Maheshwari, and Jure Leskovec},<br> title = {{BioSNAP Datasets}: {Stanford} Biomedical Network Dataset Collection},<br> howpublished = {\url{http://snap.stanford.edu/biodata}},<br> month = aug,<br> year = 2018<br> }<br> ```