Generation of transcriptome datasets.

Ten pair wise Comparisons were performed on this active probeset. Expression difference between each sample pair was set at a strict statistically significant adjusted p value 1, (0-14dpi)2, (0-21dpi)3 and (0-28dpi)4. The Temporal Series measured activity changes between six different infected time point combinations viz (7-14dpi)5, (7-21dpi)6, (7-28dpi)7, (14-21dpi)8, (14-28dpi)9 and (21-28dpi)10. The resultant transcriptome database (S2 Table) set out for each pairing in order of decreasing p values and corresponding fold changes. (XLSX)