Additional file 1 of The putative methyltransferase LaeA regulates mycelium growth and cellulase production in Myceliophthora thermophila

Additional file 1: Table S1. Primers used in this study. Table S2. The profiles of RNA-seq reads mapped to the genome of M. thermophila and the differential expression analysis. Table S3. Genes showing significantly differential transcriptional levels in strain ∆laeA on glucose compared to the wild-type strain. Table S4. KEGG analysis of the 337 genes with up-regulated expression levels in strain ∆laeA on glucose. Table S5. Transcriptional profile of genes involved in metabolic pathway in M. thermophila. Table S6. Transcription factors showing significantly differential transcriptional levels in strain ∆laeA on glucose as compared to the wild-type strain. Table S7. Genes showing significantly differential transcriptional levels in strains Δcre-1, Δgrf-1, Δgrf-2, and Δgrf-3 on glucose compared to the wild-type strain. Table S8. KEGG analysis of genes showing significantly up-regulated transcriptional levels in all strains (∆cre-1, Δgrf-1, Δgrf-2, and Δgrf-3), compared to the wild type. Table S9. The analysis of H3K9 methylation level in ΔlaeA compared to WT by ChIP-seq. Table S10. Genes showing significantly differential transcriptional levels in strain ΔlaeA on Avicel for 2 d compared to the WT strain and functional category analysis of the genes expressed more highly in strain ΔlaeA (p values < 0.005). Table S11. Genes showing significantly differential transcriptional levels in strain ΔlaeA on Avicel for 4 d compared to the WT strain and functional category analysis of the genes expressed more highly in strain ΔlaeA (p values < 0.05). Table S12. Transcriptional levels of CAZyme genes in strain ΔlaeA on Avicel for 2d and 4 d. Table S13. Transcriptomic profiles of the genes related to the secondary metabolism in the strain ΔlaeA when response to Avicel.