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Supplementary Data of "Stepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction"

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DataCite Commons2023-07-18 更新2024-07-29 收录
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https://figshare.com/articles/dataset/Supplementary_Data_of_Stepwise_pathway_for_early_evolutionary_assembly_of_dissimilatory_sulfite_and_sulfate_reduction_/20766064
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<strong>Sinje Neukirchen</strong><sup><strong>1</strong></sup><strong>, Inês A. C. Pereira</strong><sup><strong>2</strong></sup><strong>, Filipa L. Sousa</strong><sup><strong>1</strong></sup><strong>*</strong> <sup>1</sup> Genome Evolution and Ecology Group, Department of Functional and Evolutionary Ecology, University of Vienna, Djerassiplatz 1, 1030 Wien, Austria <sup>2</sup> Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Av. da República, 2780-157 Oeiras, Portugal. <br> <br> Supplementary Data 1 – FASTA files containing all amino acid sequences including the NCBI RefSeq/GenBank/IMG accession numbers per protein. Supplementary Data 2 – Mapping table of selected sequences after 90 % global identity redundancy reduction to the corresponding protein sequence accession numbers, genome identifiers, and taxonomic affiliation. Supplementary Data 3 – Trimmed multiple sequence alignments of protein sequences present in only complete genomes. Supplementary Data 4 – Trimmed multiple sequence alignments of protein sequences covering the full diversity including metagenome-derived genomic assemblies. Supplementary Data 5 – Phylogenetic reconstruction of protein sequences present in only complete genomes using ModelFinder with best model selection. Supplementary Data 6 – Phylogenetic reconstruction of protein sequences covering the full diversity including metagenome-derived genomic assemblies using ModelFinder with best model selection. Supplementary Data 7 – Phylogenetic reconstruction of protein sequences present in only complete genomes using the model LG+I+G4. Supplementary Data 8 – Phylogenetic reconstruction of protein sequences covering the full diversity including metagenome-derived genomic assemblies using the model LG+I+G4. <br> <br>
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2022-09-01
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