Raman and Kaltenbacher et al., 2026 - Osteosarcoma WGS

Processed genomic / transcriptomic data related to Raman and Kaltenbacher et al., bioRxiv 2026 (10.64898/2026.09.14.751472v1). Files included in this repository have been processed and analyzed as described in the manuscript. WGS DFCI WGS - SNVs.csv (newly generated data, single nucleotide variants) DFCI WGS - SVs.csv (newly generated data, structural variants) DFCI WGS - CNVs.csv (newly generated data, copy number variants) ctDNA LEOPARD ctDNA - SVs.csv (Shulman et al. J. Clin. Oncol. 2024) CMI ctDNA - SVs.csv (Wong et al. Cancer Res. 2025) bulk RNA DFCI bulk RNA - counts matrix.tsv (newly generated data - also available at ALSF scPCA SCPCP000017)