Network structure of host-parasite networks from Central Europe
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https://figshare.com/articles/dataset/Network_structure_of_host_parasite_networks_from_Central_Europe/96302/1
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Network metric for host-parasites communities, based on adjacency matrices, divided into all parasites (ALL), facultative parasites only (FAC). and obligatory parasites only (OPC). <strong>network :</strong> unique network identifier (community number, parasite type, host type)<br><strong>connectance :</strong> number of infections / community richness<br><strong>size :</strong> total richness of the community (hosts + parasites)<br><strong>parasites :</strong> number of parasites<br><strong>hosts :</strong> number of hosts<br><strong>nestedness :</strong> NODF measure of nestedness<br><strong>average_host_range :</strong> mean host range, measured using the RR metric - values closer to 0 indicate generality<br><strong>number_modules :</strong> number of community modules found<br><strong>modularity :</strong> Qbip modularity, optimized using the LP-BRIM method<br><strong>null_nestedness :</strong> average NODF of 1000 null replicates<br><strong>nestedness_pvalue</strong> : significancy of the deviation between null and empirical nestedness values<br><strong>null_modularity :</strong> average Qbip of 1000 null replicates<br><strong>modularity_pvalue :</strong> significancy of the deviation between null and empirical nestedness values<br><strong>null_model :</strong> type of null model, either I or II<br><strong>parasite_type :</strong> type of parasites considered (all, facultative, or obligatory)
本数据集为基于邻接矩阵构建的宿主-寄生物群落网络度量指标,按寄生物类群划分为全寄生物组(ALL)、仅兼性寄生物组(FAC)与仅专性寄生物组(OPC)。
<strong>网络标识(network)</strong>:唯一网络标识符,包含群落编号、寄生物类群与宿主类群信息
<strong>连接率(connectance)</strong>:感染事件数 / 群落丰富度
<strong>群落规模(size)</strong>:群落总丰富度(宿主+寄生物)
<strong>寄生物数量(parasites)</strong>:群落内寄生物总数
<strong>宿主数量(hosts)</strong>:群落内宿主总数
<strong>嵌套性(nestedness)</strong>:采用NODF法计算的嵌套性指标
<strong>宿主平均广度(average_host_range)</strong>:基于RR度量法计算的宿主平均利用广度,取值越接近0代表宿主广谱性越强
<strong>模块数(number_modules)</strong>:群落中检测到的模块数量
<strong>模块化指数(modularity)</strong>:采用LP-BRIM方法优化得到的Qbip模块化指数
<strong>零模型嵌套性(null_nestedness)</strong>:1000次零模型重复实验的平均NODF值
<strong>嵌套性显著性(nestedness_pvalue)</strong>:零模型与经验嵌套性值的偏差显著性水平
<strong>零模型模块化(null_modularity)</strong>:1000次零模型重复实验的平均Qbip值
<strong>模块化显著性(modularity_pvalue)</strong>:零模型与经验嵌套性值的偏差显著性水平
<strong>零模型类型(null_model)</strong>:零模型类别,分为I型与II型
<strong>寄生物类群(parasite_type)</strong>:研究所纳入的寄生物类群(全寄生物、兼性寄生物或专性寄生物)
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figshare创建时间:
2016-01-11
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