Population differentiation estimates based on neutral and ELA loci.

Conventional F-statistics (FST), ΦST based on a K2P distance matrix, and global differentiation exact tests with p-values are reported. F′, an FST analog based on the similarity index [80], with standard error (± SE), and the Jost's D parameter (Dest) are also shown. Divergence estimates for the DQA locus are reported both excluding (DQA) and including (DQAALL) individuals with multi-locus genotypes.1 Estimates based on 13 loci.2 95% confidence interval = 0.026–0.053.3 Represents the harmonic mean of the estimated parameter over all loci.