HLA-related associated polymorphisms in the HIV Pol protein in different CD4 count strata.

The table shows the results of the association analysis between HLA Class I alleles and HIV viral polymorphisms in HIV Pol. The columns of the table detail the HIV protein, the associated HLA Class I allele and viral polymorphism, whether the association lies in, or within, the flanking region of a known restricted epitope and whether this association is expected to revert in HLA-mismatched hosts. The q values for the statistically significant associations for the whole cohort, the ‘high’ CD4 count subgroup (>500 cells/µl) and ‘low’ CD4 count subgroup (2-adjusted odds ratios for the ‘high’ and ‘low’ groups. In the final column, the p value is reported, where there is a significant difference between the two odds ratios.