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Table S1 - Genomic Characterization of Group C Orthobunyavirus Reference Strains and Recent South American Clinical Isolates

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Percent sequence identities between orthobunyaviruses. Complete coding sequences for nine group C viruses (this study) and eight orthobunyaviruses reference sequences (RefSeq of GenBank) were aligned with MUSCLE, trimmed to remove non-aligned terminal sequences and calculated for sequence identity percentages. Both nucleotide sequences (L, M and S segments) and correspondent protein sequences (L protein, M polyprotein and N protein) were analyzed with the results shown in the upper-right and lower-left of the tables, respectively. Shaded areas, results for comparison between viruses of same serogroup, i.e., Simbu group or group C viruses. Names of group C reference viruses are shown in bold. (DOCX)

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2014-03-14
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