Genotyping data of 269 maize inbred lines
收藏DataCite Commons2023-06-10 更新2024-08-18 收录
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https://figshare.com/articles/dataset/Genotyping_data_of_269_maize_inbred_lines/23486867/1
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The data set includes genotyping data of 269 maize inbred lines developed from whole genome sequencing (WGS) data. Among them, WGS data of 254 lines are publicly available (https://doi.org/10.1093/gigascience/gix134). In addition, we generated WGS of 15 inbred lines that are resistant or susceptible to the bacterial maize disease Goss’s wilt. All WGS reads were trimmed and aligned to the B73 reference genome sequence (B73v3). Reads uniquely mapped to the reference genome were retained for variant calling. SNPs with the minor allele frequency higher than 5% and the genotyping missing data rate less than 30% were kept for genome-wide association mapping of genomic loci conferring Goss’s wilt resistance. SNP data were split to ten files each of which stores genotyping data for a chromosome.
提供机构：
figshare
创建时间：
2023-06-10
