Identification of enhancer-promoter contacts in squamous cancer cells

NIAID Data Ecosystem2026-03-13 收录

癌症基因组数据

增强子-启动子互作

数据链接：

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE166234 数据链接链接失效反馈

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资源简介：

This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

创建时间：

2022-01-18

Data_Sheet_1_Genomic Positional Dissection of RNA Editomes in Tumor and Normal Samples.ZIP

RNA编辑

癌症基因组数据

RNA editing is phenomenon that occurs in both protein coding and non-coding RNAs. Increasing evidence have shown that adenosine-to-inosine RNA editing can potentially rendering substantial functional

NIAID Data Ecosystem40

Genome wide screen of CREB and CRTC2 occupancy in LKB1 mutant NSCLC cell line A549

癌症基因组数据

转录调控

CREB and CRTC2 ChIPseq analysis in LKB1-deficient and LKB1-reconstituted A549 NSCLC cells A549 cells expressing the pBabe vector or full length LKB1 were cultured and ChIPseq for CRTC2 and CREB was pe

NIAID Data Ecosystem30

Table8_RNA-SSNV: A Reliable Somatic Single Nucleotide Variant Identification Framework for Bulk RNA-Seq Data.XLSX

癌症基因组数据

RNA-seq数据分析

The usage of expressed somatic mutations may have a unique advantage in identifying active cancer driver mutations. However, accurately calling mutations from RNA-seq data is difficult due to confound

NIAID Data Ecosystem30

Targeted genomic screen reveals focal long non-coding RNA copy number alterations in cancer

癌症基因组数据

lncRNA拷贝数变异

The landscape of somatic copy-number alterations (SCNAs) affecting long non-coding RNAs (lncRNAs) in human cancer remains largely unexplored. While the majority of lncRNAs remains to be functionally c

NIAID Data Ecosystem40

Multi-region Genomic for Esophageal Carcinoma

癌症基因组数据

癌细胞异质性

In this study, we performed whole-exome sequencing (WES) on 33 tissue samples from 6 esophageal cancer patients with lymph node metastasis, compared the differences of the genomic map and evolutionary

NIAID Data Ecosystem30

Identification of enhancer-promoter contacts in squamous cancer cells

资源简介：

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