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Alignment and phylogenetic tree of section Habrostictis

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Figshare2023-09-29 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Alignment_and_phylogenetic_tree_of_section_Habrostictis/24219238
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ITS+LSU alignment and tree of section Habrostictis (Orbilia) including Orbilia multiserpentina. The phylogenetic tree was based on a Maximum Likelihood analysis from the combined ITS / LSU sequence alignment. Analyses were done on the Phylosuite v. 1.2.3 platform (Zhang et al. 2020). The alignment was performed with MAFFT v. 7 (Katoh & Standley 2013) and manually checked and trimmed. The ML phylogenies were inferred using IQ-TREE 2 (Minh et al. 2020) under the model automatically selected by IQ-TREE for 5 000 ultrafast (Minh et al. 2013) bootstraps. Bootstrap support values and Bayesian posterior probabilities are given at the nodes. Orbilia poitevinica and O. paravitalbae were used as outgroup. The novel taxon is indicated in bold. The scale bar on the tree indicates the expected number of changes per site
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2023-09-29
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