Repeat annotation of <i>Linum tenue</i>
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The file contains the annotation for the repetitive regions in Linum tenue . The detection of repeats has been done with RepeatMasker/RepeatModeler (https://www.repeatmasker.org/) using a custom repeat library. The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below. It is part of this article Gutiérrez-Valencia, J., Fracassetti, M., Berdan, E. L., Bunikis, I., Soler, L., Dainat, J., ... & Slotte, T. (2022). Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level. Current Biology , 32 (20), 4360-4371. 10.1016/j.cub.2022.08.042 The file is in BED format converted with [BEDOPS](https://bedops.readthedocs.io/en/latest/content/reference/file-management/conversion/rmsk2bed.html). The fourth (Repeat class) and eleventh (Repeat name) columns have been reversed to highlight the Repeat name in the visualization. Query sequence1chromosome Query start2start Query end3stop Repeat class4id Smith-Waterman score5score Strand6strand Percentage, substitutions7 Percentage, deleted bases8 Percentage, inserted bases9 Bases in query, past match10 Repeat name11 Bases in complement of the repeat consensus sequence12 Match start13 Match end14 Unique ID15 Higher-scoring match (optional)16



