Fungal genomics - Aspergillus hancockii

Files associated with this project:\n\n**Sequencing reads**\n== MiSeq PE and Mitochrondrial reads ==\n- FGS19M_fastq.7z\n\n== HiSeq PE Data ==\n- DMLFGS19H_fastq.7z\n\n**Assemblies**\n\n= Mitochondrial genome =\n- A_hancockii_mito_complete.fa (complete mitochrondrial genome)\n\n= Nuclear genome =\n- FRR3425_A_hancockii_noMITO_min_200.fasta (contigs > 200bp)\n- FRR3425_A_hancockii_noMITO_belowCutoff_200.fasta (contigs < 200bp)\n\n**Gene Calls (AUGUSTUS)**\n- FRR3425.outfile (GFF)\n- FRR3425.outfile.aa (Amino acid calls for genes)\n- FRR3425.outfile.cdexons (Exons)\n- FRR3425.outfile.codingseq (Coding seqs)\n\n**dbCAN results**\n- dbCAN_results.xlsx\nLineage: Fungal isolation DNA extraction --> Library preparation --> Illumina (both HiSeq and MiSeq) --> Bioinformatics (assembly, gene calling, dbCAN)