Local synthetic datasets generation - manuscript data
收藏资源简介:
Datasets generated under the work "Semantically Rich Local Dataset Generation for Explainable AI in Genomics". Relevant files and directories: - datasets.tar.gz: Full copy of the GitHub repository, except it contains the datasets generated in the manuscript. The repo structure is organized as follows: 1_hyperparameter_search - Contains the Optuna output and the datasets generated from the top 5 trials of each strategy. 2_performanceComparison - Contains the datasets generated for the top trial of each strategy across more seeds. 3_ablation_studies - Directory with the output of all experiments that evaluated the impact of some hyperparameters on the evolutionary search. 4_generalization - Datasets generated from diverse input sequences. data/cache - Fasta of the human genome along with transcript cache used to extract exon triplets. figures.ipynb - Notebook to generate the manuscript figures.



