smRNA-seq count table

Normalized count files of the frontal smRNA-seq dataset from the RiMod-FTD resource (https://www.biorxiv.org/content/10.1101/2020.12.01.405894v4). <br> The data was processed as follows: <br> After removing sequencing adapters, all FastQ files were uploaded to OASIS2 for analysis. On average, 3,430,613 (+/- 1,365,407) reads could be uniquely mapped per sample. Subsequent differential expression analysis was performed on the counts yielded from OASIS2, using DESeq2 and correcting for gender and PH-value, as was done for the RNA-seq data. Additionally, we added a batch variable to the design matrix to correct for the two different batches of this dataset. In total, 2904 human smRNA genes could be detected. For visualization and clustering, the data was transformed using the variance stabilization transformation from the DESeq2 package.