Summary of results for the genome-wide association study using a general linear model analysis and sex-stratified case-control analysis for canine hip and elbow dysplasia in Bernese mountain dogs.

The SNP-ID, the position on dog chromosome (CFA) in base pairs (bp), minor allele, minor allele frequency (MAF) for all, affected (MAFa) and unaffected (MAFu) dogs (controls), variance explained by the single SNPs (VSNP) and −log10P-values (−log10P) of the general model analysis are given. Odds ratios (OR) with 95% confidence intervals (CI) are from a sex-stratified case-control analysis for CHD- and CED-affected dogs. Positional candidate genes with their distance to the associated SNP are shown according to the dog genome assembly build 2.1.