QuPath Segmentation masks of NeuroPAL Images

QuPath segmentation masks of 31 C. Elegans NeuroPAL volumes (20 heads, 11 tails) originally published here. Please note that the segmentation files do not contain names; you can assign them names by crossreferencing the segmentation centroids with the positions in the neuron ID .mat file. Pattern Description Contents <name>.nd2 Original colorstack nd2 file. Raw acquisition, nikon metadata. <name>.mat NeuroPAL_ID colorstack file. Processed acquisition, NeuroPAL_ID settings. <name>_ID.mat NeuroPAL_ID neuron file. Neuron metadata, including positions and names. <name>.qpdata QuPath segmentation file. Neuron segmentations. Zenodo Link (Unsegmented).url Internet shortcut to original zenodo dataset. URL.