Chloroplast Genome data of Five Amygdalus Species

Chloroplasts (cp) are semi-autonomous organelles with a conserved, maternally inherited genome separate from the rest of the plant. We sequenced, assembled, and performed phylogenetic analysis on the complete cp genomes of five Amygdalus species (P. communis, P. mongolica, P. pedunculata, P. triloba, and P. mira) aimed to improve understanding of Amygdalus taxonomy and the efficient use of Amygdalus forest resources.